Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914121.1_cds_XP_016464149.1_57213
CDS Infomation

[gene=LOC107787138] [db_xref=GeneID:107787138] [protein=la-related protein 1C-like] [protein_id=XP_016464149.1] [location=join(65538..66017,66219..66759,66832..66994,67156..67246,68537..68608,70035..70340)] [gbkey=CDS]
Sequence

ATGGCCATGCCGGCCGATTCTTCAGCATCGAACAACTCGCCGCTTTCGCCTGCCACCACC
GCCGACGGTAGCTCCGCCGTCAACAGTCCTCAGTCTCGCCGGAGTTTAACCTCGCCTTGG
GCACAAGTCGTCCGCGGTGGCAGCGACGCTGAAGCAACCACGGTCACCGCTCCTCGCTCC
CCGTCAGCATCACCATTACCGCCGGAGAAAGTTTCGGTTCCCGATAGCTCGGCTCAGAAA
ATTTCTCCGGAGAATGAGTTTTCCGATAGTCAGCCTGAGAACTCCAGTGGTACTAATGAT
GCTTTAGGTCCTCCGAAAAAGCCTGCTTGGAACAAACCTTTAAACGGCGTCGTTGAAGTC
GGTTCGGTTATGGGTGGTGCTGTTGCTTGGCCTGCTCTCTCTGAGTCTACTCGGGCCATT
CCGAAATCGTCTTCGGATTCATCGAAACCAGTTGCAGATGGATCAAACACACTTTCTCAG
GGACCTGTCATTCCACCGTTACTGCAAAAACAAGCTAATAGTAATGCAAACTCACATTCA
AATGCAAATCATACAATGCCGGTTAGACAAAGATCAATGAAGCATCGCGGTGGCAGCAGC
AGTAGCAGTGTTGGTAGTGGCCCGGGTGGTGGATCTAATCAGAGCGGCTTTAGTCGAGCT
CCACCTCCACCTCCACCCCCACCGCCATTGCCACCACCATTTCCTGTGATGCCTTATGGG
AATCTGTTACCTCCTGTTCTTGATCCTCGTGTGAGAGGTCCTAGACCCGTTGGAGGAGTT
CCTTCTCAGCCACATGGAGGTGATCAATCTTCACATAGAAATCCAAACAGGAAGGGCAAC
TTTGGGGGCCGACCCCGTGGAGATGGATCTTATCATAGTAGGCGTGATCAAGATCGGAGA
GATGTTCACCAAGCCCCTCAATTTGTCCCTCCTCCTGTAGGGTTTATAACACCCCAGTCC
CCTGGTTCTGCCCCATTTATGCCTGCACCTTTGAGACCCTTTGCTGGTCCAGTGGGATAT
GATATGCCACCTCAATTCATATATGTCCCCACAATGCCTCCAGAGTCCTTTAGGGGTGTT
CCAATTATCCCGCCACCTCCTCCACCACCACCACCTTTCTTTTTTCCAGTCGTGGATCCA
AACTTACCTGCCTTGTTGGTTAAACAGATCGAATATTACTTCAGTGATGATAATCTGGTG
AAAGATGACTTTCTGAGGTCAAAAATGGATGAAGAAGGCTGGGTTCCTATTGAATTGATT
GCTAACTTTCCTCGTGTTAGGCATTTGACAAACAACATCCAGTTTATCTTGGACTGTTTG
AGGGCTTCAACGCTTGTGGAAGTGCAGGATGATAAGGTAAGGAGACGTGATGATTGGAAG
AAATGGATACATACTTCTGGCCATCTTACAGCTGATTCAGGCTCTCAAACTCCTGGTGAA
TCGACGGAAAATGCCCTAATGAGTTCGTTCCAGGAGATCTCTTTGGATGAATCAGGTAAC
GACAAAAGTAATGATGTGGATAGGCGAGATGTTCAGGTCGAGGTGGCTGTCAGTGGCTTG
TCGGAGGAATTGACTAGCCAGTCAAAATTGGTTCAGGAAGGTAATGCTGAAGAAATCTGT
TCCAGCCACGCAGGAAGCAGTCAAGTTTGTTGA

Peptide Sequence

PEP ID

XP_016464149.1
PEP Infomation

PREDICTED: la-related protein 1C-like [Nicotiana tabacum]
Sequence

MAMPADSSASNNSPLSPATTADGSSAVNSPQSRRSLTSPWAQVVRGGSDAEATTVTAPRS
PSASPLPPEKVSVPDSSAQKISPENEFSDSQPENSSGTNDALGPPKKPAWNKPLNGVVEV
GSVMGGAVAWPALSESTRAIPKSSSDSSKPVADGSNTLSQGPVIPPLLQKQANSNANSHS
NANHTMPVRQRSMKHRGGSSSSSVGSGPGGGSNQSGFSRAPPPPPPPPPLPPPFPVMPYG
NLLPPVLDPRVRGPRPVGGVPSQPHGGDQSSHRNPNRKGNFGGRPRGDGSYHSRRDQDRR
DVHQAPQFVPPPVGFITPQSPGSAPFMPAPLRPFAGPVGYDMPPQFIYVPTMPPESFRGV
PIIPPPPPPPPPFFFPVVDPNLPALLVKQIEYYFSDDNLVKDDFLRSKMDEEGWVPIELI
ANFPRVRHLTNNIQFILDCLRASTLVEVQDDKVRRRDDWKKWIHTSGHLTADSGSQTPGE
STENALMSSFQEISLDESGNDKSNDVDRRDVQVEVAVSGLSEELTSQSKLVQEGNAEEIC
SSHAGSSQVC

Transcript Sequence

Gene sequence data has not been registered.